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<h1>Molecule Class Reference</h1><!-- doxytag: class="Molecule" --><div class="dynheader">
Inheritance diagram for Molecule:</div>
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<p><a href="classMolecule-members.html">List of all members.</a></p>
<table border="0" cellpadding="0" cellspacing="0">
<tr><td colspan="2"><h2>Public Member Functions</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top">&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classMolecule.html#a7e7d290ae641518ad4c4d5303b519d0f">Molecule</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">virtual&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classMolecule.html#a1ff980b574a62526abff3d631c83bf94">~Molecule</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="el" href="structConcentration.html">Concentration</a> *&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classMolecule.html#a6187f526e73813139b4611a576086a0c">getConcentration</a> ()</td></tr>
<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Get the current concentration of this molecule in the cell.  <a href="#a6187f526e73813139b4611a576086a0c"></a><br/></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="el" href="structQuantity.html">Quantity</a> *&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classMolecule.html#a37c63ca213548e683a45759b36cd944a">getInitialConcentration</a> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top">int&nbsp;</td><td class="memItemRight" valign="bottom"><a class="el" href="classMolecule.html#ad163d9cd82cf080bc1e08270d748f3f6">getMoleculeID</a> ()</td></tr>
<tr><td class="mdescLeft">&nbsp;</td><td class="mdescRight">Get the unique identifier for this <a class="el" href="classMolecule.html">Molecule</a>.  <a href="#ad163d9cd82cf080bc1e08270d748f3f6"></a><br/></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="adaf2d16cbb77899127b5c62676ed7dbf"></a><!-- doxytag: member="Molecule::setCalculate" ref="adaf2d16cbb77899127b5c62676ed7dbf" args="(bool)" -->
void&nbsp;</td><td class="memItemRight" valign="bottom"><b>setCalculate</b> (bool)</td></tr>
<tr><td colspan="2"><h2>Public Attributes</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="af3185312f4ed7bbee5cfc4f5fd6ee633"></a><!-- doxytag: member="Molecule::rkData" ref="af3185312f4ed7bbee5cfc4f5fd6ee633" args="" -->
float *&nbsp;</td><td class="memItemRight" valign="bottom"><b>rkData</b></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a8af5d36d8b418e217b1013112d052616"></a><!-- doxytag: member="Molecule::name" ref="a8af5d36d8b418e217b1013112d052616" args="" -->
string&nbsp;</td><td class="memItemRight" valign="bottom"><b>name</b></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a03cc328f42d82ac53632a53398a03890"></a><!-- doxytag: member="Molecule::calculate" ref="a03cc328f42d82ac53632a53398a03890" args="" -->
bool&nbsp;</td><td class="memItemRight" valign="bottom"><b>calculate</b></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a4eafa2831869e116f64c86987f1cac81"></a><!-- doxytag: member="Molecule::nodeID" ref="a4eafa2831869e116f64c86987f1cac81" args="" -->
int&nbsp;</td><td class="memItemRight" valign="bottom"><b>nodeID</b></td></tr>
<tr><td colspan="2"><h2>Protected Attributes</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a30dbe67851fa59d3289cfd7cab22709b"></a><!-- doxytag: member="Molecule::concentration" ref="a30dbe67851fa59d3289cfd7cab22709b" args="" -->
<a class="el" href="structConcentration.html">Concentration</a> *&nbsp;</td><td class="memItemRight" valign="bottom"><b>concentration</b></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="abe3c6ef293314f648eabb3b91361a371"></a><!-- doxytag: member="Molecule::initialConcentration" ref="abe3c6ef293314f648eabb3b91361a371" args="" -->
<a class="el" href="structQuantity.html">Quantity</a> *&nbsp;</td><td class="memItemRight" valign="bottom"><b>initialConcentration</b></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a563a9a295191833b51660f77749e3628"></a><!-- doxytag: member="Molecule::moleculeID" ref="a563a9a295191833b51660f77749e3628" args="" -->
int&nbsp;</td><td class="memItemRight" valign="bottom"><b>moleculeID</b></td></tr>
<tr><td colspan="2"><h2>Static Protected Attributes</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a0b236c9a81b67071221200700bae0444"></a><!-- doxytag: member="Molecule::moleculeCounter" ref="a0b236c9a81b67071221200700bae0444" args="" -->
static int&nbsp;</td><td class="memItemRight" valign="bottom"><b>moleculeCounter</b> = 0</td></tr>
</table>
<hr/><h2>Constructor &amp; Destructor Documentation</h2>
<a class="anchor" id="a7e7d290ae641518ad4c4d5303b519d0f"></a><!-- doxytag: member="Molecule::Molecule" ref="a7e7d290ae641518ad4c4d5303b519d0f" args="()" -->
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          <td class="memname">Molecule::Molecule </td>
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          <td>&nbsp;)&nbsp;</td>
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<p>Fill in </p>

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<a class="anchor" id="a1ff980b574a62526abff3d631c83bf94"></a><!-- doxytag: member="Molecule::~Molecule" ref="a1ff980b574a62526abff3d631c83bf94" args="()" -->
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          <td class="memname">Molecule::~Molecule </td>
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          <td>&nbsp;)&nbsp;</td>
          <td><code> [virtual]</code></td>
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<hr/><h2>Member Function Documentation</h2>
<a class="anchor" id="a6187f526e73813139b4611a576086a0c"></a><!-- doxytag: member="Molecule::getConcentration" ref="a6187f526e73813139b4611a576086a0c" args="()" -->
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          <td class="memname"><a class="el" href="structConcentration.html">Concentration</a> * Molecule::getConcentration </td>
          <td>(</td>
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          <td>&nbsp;)&nbsp;</td>
          <td></td>
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<p>Get the current concentration of this molecule in the cell. </p>
<dl class="return"><dt><b>Returns:</b></dt><dd>the current concentration.</dd></dl>
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<a class="anchor" id="a37c63ca213548e683a45759b36cd944a"></a><!-- doxytag: member="Molecule::getInitialConcentration" ref="a37c63ca213548e683a45759b36cd944a" args="()" -->
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          <td class="memname"><a class="el" href="structQuantity.html">Quantity</a> * Molecule::getInitialConcentration </td>
          <td>(</td>
          <td class="paramname"></td>
          <td>&nbsp;)&nbsp;</td>
          <td></td>
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<p>Fill in </p>

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<a class="anchor" id="ad163d9cd82cf080bc1e08270d748f3f6"></a><!-- doxytag: member="Molecule::getMoleculeID" ref="ad163d9cd82cf080bc1e08270d748f3f6" args="()" -->
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          <td class="memname">int Molecule::getMoleculeID </td>
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          <td>&nbsp;)&nbsp;</td>
          <td></td>
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<p>Get the unique identifier for this <a class="el" href="classMolecule.html">Molecule</a>. </p>
<p>Fill in </p>

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<hr/>The documentation for this class was generated from the following files:<ul>
<li>data/<a class="el" href="Molecule_8h_source.html">Molecule.h</a></li>
<li>data/Molecule.cpp</li>
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